PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0066s0103.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family ERF
Protein Properties Length: 497aa    MW: 53419.6 Da    PI: 8.3301
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0066s0103.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-19290340256
                  AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                           ++GVr ++ +grW AeIrd       r r++lg+f+t+e+Aa+a++aa++kl+g+
  Mapoly0066s0103.1.p 290 VFRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTPEDAARAYDAAARKLRGA 340
                          59*******.**********32....25**************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.3E-28289347IPR001471AP2/ERF domain
SuperFamilySSF541715.82E-21290348IPR016177DNA-binding domain
PfamPF008472.6E-13290339IPR001471AP2/ERF domain
PROSITE profilePS5103221.904290347IPR001471AP2/ERF domain
SMARTSM003802.1E-33290353IPR001471AP2/ERF domain
CDDcd000186.80E-19291346No hitNo description
PRINTSPR003675.1E-9291302IPR001471AP2/ERF domain
PRINTSPR003675.1E-9313329IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 497 aa     Download sequence    Send to blast
MALHDVLLSS SYNAIPFFRS ETMMKQELSW LDERSWRSCA RCSSVSPQVI CPACTTLAMS  60
ANPTSLFSSS PVGSDSAHNA ALLDDQFWTF TNGTSDQKTG PIKREKLEED HLKSLPSIMP  120
SLQHSFASTR DGGSDGQEVD LDMIGIGAVV GRGVLFGANS SDNFATAAFT TALAPSGSIP  180
MLNRSSSSSS PPSSSCGGAF IHLADLLRQT RAPSPPTGGN LKESAVLSPP VSAAMTPGCH  240
QTVTHNSIQQ PQQARPAIPV SAAEEVESKV VSTTDSRVTS GDGTGTSGRV FRGVRKRPWG  300
RWSAEIRDRI GRCRHWLGTF DTPEDAARAY DAAARKLRGA KARTNFTIPT SPSSPLQMSP  360
QPDPATSRQR SKPSLQRAAS MKAAYSRPIS ENESLISSKD RCLTKSNTMW PRVNEVKIAD  420
MASFASNLSQ RNLGASSPQS DLCASDNHSA YDMLELELNL GARSPSYRDN GTVAFDSSQS  480
VFVLEFPQQQ WRSYSL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-15288348364ATERF1
3gcc_A4e-15288348364ATERF1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.12e-17ERF family protein